Examples
========

The examples provide some usage examples of ClickPoints to demonstrate its various functions and how data can be
processed with ClickPoints and later easily evaluated with ClickPoints.

To kept the download size of ClickPoints down, the examples are kept in a separate repository. They can be downloaded
`here <https://github.com/fabrylab/clickpointsexamples/archive/refs/heads/master.zip>`_.

.. toctree::
    :caption: Examples to retrieve data from clickpoints files
    :maxdepth: 1

    examples/example_markers.ipynb
    examples/example_tracks.ipynb

.. toctree::
    :caption: List of Examples
    :maxdepth: 2

    Count Animals <examples/example_count.ipynb>
    Flourescence intensities in plant roots <examples/example_plantroot.ipynb>
    Bead Tracking <examples/example_tweezer.ipynb>
    Simulation Visualisation <examples/example_simulation.ipynb>